Source: sibsim4
Section: science
Priority: optional
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
DM-Upload-Allowed: yes
Uploaders: Nelson A. de Oliveira <naoliv@debian.org>,
 Andreas Tille <tille@debian.org>
Build-Depends: cdbs, debhelper (>= 7)
Standards-Version: 3.8.4
Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/sibsim4/trunk/?rev=0&sc=0
Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/sibsim4/trunk/
Homepage: http://sibsim4.sourceforge.net/

Package: sibsim4
Architecture: any
Depends: ${shlibs:Depends}, ${misc:Depends}
Description: align expressed RNA sequences on a DNA template
 The SIBsim4 project is based on sim4, which is a program designed to align
 an expressed DNA sequence with a genomic sequence, allowing for introns.
 SIBsim4 is a fairly extensive rewrite of the original code with the following
 goals:
  * speed improvement;
  * allow large, chromosome scale, DNA sequences to be used;
  * provide more detailed output about splice types;
  * provide more detailed output about polyA sites;
  * misc code cleanups and fixes.
